FastQCFastQC Report
Sun 21 May 2023
EGAF00007959015

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007959015
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences474583
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG28560.6017914674566935No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7580.15971916398185354No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT6700.14117656974649323No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5290.11146627671029094No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA5220.10999129762338726No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT4990.1051449377664181No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4870.10261640218886896No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)