FastQCFastQC Report
Sun 21 May 2023
EGAF00007959017

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007959017
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences440379
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG64421.4628308797649296No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6580.14941675238828372No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5830.13238596754159485No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT4970.11285733425072494No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA4630.10513671178689266No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4450.10104932342368733No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)