FastQCFastQC Report
Sun 21 May 2023
EGAF00007959024

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007959024
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences439665
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTAGAAGCGGCGCGGGAGCTACCAGACAGGCGACCCGGTGCGG11630.2645195774055247No Hit
AGTCACGTTACGAGAAGAGGTGGTTTTGCTGGAGGCCGGCTGCG9030.20538364436559656No Hit
AGAACTGAGCCTTCACTGGTTCAGCTCCCTCGGTCGAGTACGCT7000.1592121274151911No Hit
GGCGCCCGCGGTTCAACCAATGGTAACACAAGAACTGAGCCTTC5640.12827948551738255No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT5500.12509524296907873No Hit
ATCGCCCGGAACTACCTGGCTAGTGTGACCGGTCTCGGCAGCGG4950.11258571867217085No Hit
GTCGGTGCAGTTCAGACAAGTTGGGCACAGTTTACCACGAGTTT4670.10621723357556322No Hit
AGACGCTAGATGAGGAGCGTACGGAGCTGAACACAGATTTAAAT4660.1059897876792558No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)