FastQCFastQC Report
Wed 31 May 2023
EGAF00007959033

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007959033
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences461691
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTA48711.0550346443833645No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA23820.5159294853051066No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA22270.4823572475963361No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12410.2687944967521567No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5730.12410898198145512No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5040.1091639213240024No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)