FastQCFastQC Report
Sun 21 May 2023
EGAF00007959051

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007959051
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences502996
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG54891.091261163110641No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11170.22206936039252798No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG10570.2101408361100287No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC9510.18906710987761333No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7060.14035896905740802No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7010.13936492536719974No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)