FastQCFastQC Report
Wed 31 May 2023
EGAF00007959054

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007959054
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences450348
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCCTGACCACGCGGACCGGTGGAAGGACCTTCGCCCGGATCAT8950.19873520033396397No Hit
CGGACCTTCGCCCGGGTCATCTGCCGGGCCCTGTTCGATGGCAC8680.19273983674847006No Hit
GGTGGATGGGCCTTCACCAGGATCGTCAGCCGGGCCCTGCTCGA6730.14943998863101424No Hit
CATATCCGGTTCACCGTCCGGGCCACCTTCCTGGTGATATTCGA5470.12146162523204278No Hit
TTCCTGGTGATATTCAAAGTAGTCTGCTTCACCGACCGGGTGGA4750.10547398900405908No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)