FastQCFastQC Report
Sun 21 May 2023
EGAF00007959057

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007959057
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences430102
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG47711.1092717541420407No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC10070.23413050857703524No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG9170.21320523968733No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8480.19716253353855598No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT6430.1494994210675607No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA6380.14833690612924377No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG5310.12345908644926089No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG4650.10811388926347702No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4510.10485884743618955No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)