FastQCFastQC Report
Sun 21 May 2023
EGAF00007959063

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007959063
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences446805
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT49661.1114468280346013No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG48521.0859323418493527No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA23810.5328946632199729No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC14460.32363111424446905No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA10910.2441781090184756No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA8810.19717773972985977No Hit
GACAAAGCTGAAGCACAGTCCACTCCGGAAC5380.12041046989178725No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC4650.10407224628193508No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)