FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007959083

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007959083
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences403741
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG43791.084606220324416No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT6490.1607466172620566No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5080.12582323816506125No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)