FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007959115

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007959115
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences483300
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG23520.4866542520173805No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT13380.27684667908131594No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5900.12207738464721704No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)