FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007959131

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007959131
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences474937
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG25120.5289122557307601No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9580.2017109637699316No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT6960.1465457523840004No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5550.11685760427172447No Hit
GAAGAGGCTCCGGCAGTTGATCCAGTGCAGG4760.1002238191591727No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)