FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007959143

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007959143
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences405185
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT52531.296444833841332No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG35480.87564939472093No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11600.28628897910830853No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC7050.17399459506151513No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGG4950.12216641780914891No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4560.11254118489085234No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG4340.10711156632155683No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG4200.1036563545047324No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)