FastQCFastQC Report
Wed 31 May 2023
EGAF00007959199

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007959199
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences510529
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG31010.6074091775393758No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG14210.2783387427550639No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC14150.27716349120226275No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG13800.27030785714425626No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10820.21193703002180092No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA8970.17570010714376658No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC7660.15004044824094223No Hit
CCGTCTGGTGAAGCACTGCGTAGCGATAAAC6500.1273189182201207No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG6450.12633954192611976No Hit
GACCCAGCTATCGTTCAGCCGAAAGCAGCAA6210.12163853571491531No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA6120.11987565838571365No Hit
GTGGGCGGCTCTGATGCACAGAACACCTCTA5420.10616439026970065No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)