FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007959201

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007959201
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences515151
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG32620.6332123979182803No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG14690.28515910868852046No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC14440.28030616265910385No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG14360.2787532199296905No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11510.2234296351943411No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA9340.18130606365900484No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC8420.16344722227075167No Hit
CCGTCTGGTGAAGCACTGCGTAGCGATAAAC6490.1259824789236554No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG6350.12326482914718209No Hit
GTGGGCGGCTCTGATGCACAGAACACCTCTA6000.11647070470599881No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA5940.11530599765893883No Hit
GACCCAGCTATCGTTCAGCCGAAAGCAGCAA5900.11452952629423217No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)