FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007959218

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007959218
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences466074
Sequences flagged as poor quality0
Sequence length44
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGACCTTCGCCCGGGTCATCTGCCGGGCCCTGTTCGATGGCAC6420.13774636645682872No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT5160.11071203285315208No Hit
ACCCTGACCACGCGGACCGGTGGAAGGACCTTCGCCCGGATCAT4810.10320249574101965No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)