FastQCFastQC Report
Wed 31 May 2023
EGAF00007959245

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007959245
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences470151
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT26980.5738581859870552No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG21140.44964277434271116No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT17530.37285893255571084No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11920.25353556623297624No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA11410.242687987476364No Hit
CAGTCCCAACCGCAGCGTCGTAAACGTCGCG7700.16377716946257692No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC6200.1318725260607762No Hit
GACCCAGCTATCGTTCAGCCGAAAGCAGCAA5830.12400271402166538No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG5100.10847578756612236No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)