FastQCFastQC Report
Wed 8 May 2024
EGAF00007959875

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007959875
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences455593
Total Bases14.1 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT16970.37248157895314454No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8800.19315485532042856No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4880.10711314704132854No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG4600.10096731073567855No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG4600.10096731073567855No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)