FastQCFastQC Report
Wed 8 May 2024
EGAF00007959947

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007959947
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences450105
Total Bases13.9 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GACGCACTGACGGAAGGTCTGTCCGATGAAC9640.21417224869752613No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9160.2035080703391431No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG8990.19973117383721575No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8740.19417691427555792No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG8010.17795847635551706No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC5200.11552859888248297No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA4600.10219837593450416No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)