FastQCFastQC Report
Wed 8 May 2024
EGAF00007959967

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007959967
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences447094
Total Bases13.8 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11650.26057160239233806No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8640.19324795233217176No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7020.15701396126988953No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6880.15388262870895159No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA4490.10042630856151055No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)