FastQCFastQC Report
Wed 8 May 2024
EGAF00007959969

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007959969
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences427827
Total Bases13.2 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40630.9496829325872375No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11640.27207259008898454No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7380.17249963186054176No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6930.16198136162514287No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)