FastQCFastQC Report
Wed 8 May 2024
EGAF00007960195

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007960195
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences455286
Total Bases14.1 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT58371.282051282051282No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG43600.9576398132163081No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12030.26422951727046295No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC8820.19372438423320726No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA6670.14650132004937555No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA4900.10762465790733736No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC4750.10433002552241888No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)