FastQCFastQC Report
Wed 8 May 2024
EGAF00007960205

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007960205
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences483674
Total Bases14.9 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9640.19930779822773192No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC9490.19620653580717592No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7040.14555258293809464No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6290.1300462708353147No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG5060.10461591898675554No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA4890.1011011549101254No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)