FastQCFastQC Report
Wed 8 May 2024
EGAF00007960219

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007960219
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences463387
Total Bases14.3 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG43470.9380927820590566No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT26770.5777028703869552No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10230.22076579619195189No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6280.13552387097609556No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5230.1128646250326401No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG4740.10229031025902756No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)