FastQCFastQC Report
Wed 8 May 2024
EGAF00007960729

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007960729
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences490912
Total Bases16.2 Mbp
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG25860.5267746561501857No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG23180.4721823870673359No Hit
ACCGAACCTACTACTGATTACGGCGGTGACTCC5260.10714751319992179No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)