FastQCFastQC Report
Wed 8 May 2024
EGAF00007960739

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007960739
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences496363
Total Bases16.3 Mbp
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG16150.3253667175031177No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5880.11846169033550044No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC5510.11100746832459309No Hit

[OK]Adapter Content

Adapter graph