FastQCFastQC Report
Wed 8 May 2024
EGAF00007960933

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007960933
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences480911
Total Bases15.8 Mbp
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCACGTCGTCAGGAAGCAGAACGCCAGGCCGCC7860.16343980487033982No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG7840.16302392750425754No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC7180.14929997442354198No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT6840.14223005920014306No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAACTG5840.12143619089602857No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5560.11561390777087652No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)