FastQCFastQC Report
Sun 21 May 2023
EGAF00007960943

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007960943
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences439786
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21970.499561150195777No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG8520.1937305871492044No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC5960.13552045767714296No Hit
CTGATGCGTATGAAGGAAGTATCTAGCGTTTCC5140.1168750255806233No Hit
ATGTCCAACATGGACATCGATGGTATTAACACC4550.10345940980385916No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)