FastQCFastQC Report
Wed 8 May 2024
EGAF00007960945

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007960945
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences457753
Total Bases15.1 Mbp
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG9730.21256004875992077No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC6790.14833327143677924No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5960.13020122205643656No Hit
CTGATGCGTATGAAGGAAGTATCTAGCGTTTCC5800.12670588723612952No Hit
ATGTCCAACATGGACATCGATGGTATTAACACC4900.10704462887190253No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)