FastQCFastQC Report
Wed 8 May 2024
EGAF00007960947

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007960947
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences443632
Total Bases14.6 Mbp
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21220.4783243769610849No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG8630.19453060194034694No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC6100.1375013524723194No Hit
CTGATGCGTATGAAGGAAGTATCTAGCGTTTCC5160.11631261946838821No Hit
ATGTCCAACATGGACATCGATGGTATTAACACC4670.105267428859956No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)