FastQCFastQC Report
Wed 8 May 2024
EGAF00007960975

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007960975
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences532736
Total Bases16.5 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG26170.4912376862085536No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT17420.32699123017779913No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6910.12970777270543007No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG6280.11788202787121577No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG6260.11750660740028833No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCC5760.10812109562710236No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)