FastQCFastQC Report
Wed 8 May 2024
EGAF00007961019

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007961019
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences514428
Total Bases15.9 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22920.4455433996594276No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT20550.399472812521869No Hit
ATGTCCAACATGGACATCGATGGTATTAACA9020.17534037805096145No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC8060.1566788744003048No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7500.1457929972707551No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG7220.14035005870598022No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG7020.13646224544542676No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG5780.11235780322999525No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)