FastQCFastQC Report
Wed 8 May 2024
EGAF00007961259

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007961259
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences464161
Total Bases14.3 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG56691.2213434562576346No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT16950.3651750147039497No Hit
ATGTCCAACATGGACATCGATGGTATTAACA9600.20682478708896265No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7940.1710613343214962No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5380.1159080577644395No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT4770.10276606608482833No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)