FastQCFastQC Report
Wed 8 May 2024
EGAF00007961313

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007961313
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences472208
Total Bases14.6 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG28250.5982533120997526No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7720.16348727679327754No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7660.16221665028970284No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5160.10927387930742384No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)