FastQCFastQC Report
Wed 8 May 2024
EGAF00007961431

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007961431
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences450683
Total Bases13.9 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60201.3357504054956588No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8010.1777302449837247No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5560.12336830987634323No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG4610.1022891921816443No Hit
CACGCAGAACTGAAATCCCTGACCGGTGCGG4550.100957879485137No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)