FastQCFastQC Report
Wed 8 May 2024
EGAF00007961433

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007961433
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences477992
Total Bases14.8 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG29590.6190480175400425No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8260.17280623943496962No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6430.1345210798507088No Hit
CACGCAGAACTGAAATCCCTGACCGGTGCGG4810.10062929923513365No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)