FastQCFastQC Report
Wed 8 May 2024
EGAF00007961489

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007961489
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences521477
Total Bases16.1 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTA10410.1996252950753341No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9960.1909959595533456No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG7320.14037052449101303No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG6150.11793425213384291No Hit

[OK]Adapter Content

Adapter graph