FastQCFastQC Report
Wed 8 May 2024
EGAF00007961491

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007961491
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences502817
Total Bases15.5 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG25070.4985909386516367No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10420.20723245236338467No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9930.19748735623497218No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG6570.1306638399258577No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)