FastQCFastQC Report
Wed 8 May 2024
EGAF00007961732

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007961732
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences451691
Total Bases19.8 Mbp
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT13420.29710576478167594No Hit
CGGACCTTCGCCCGGGTCATCTGCCGGGCCCTGTTCGATGGCAC7460.16515715389503No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATATAGT6550.14501063780327703No Hit
ACCCTGACCACGCGGACCGGTGGAAGGACCTTCGCCCGGATCAT5020.1111379239347253No Hit
CATATCCGGTTCACCGTCCGGGCCACCTTCCTGGTGATATTCGA4970.11003097250111248No Hit
GGTGGATGGGCCTTCACCAGGATCGTCAGCCGGGCCCTGCTCGA4900.10848124049405455No Hit
GTCGCTTGGACGAGTCGGCAGGGTTGCGCCGGTTTCGTTGGCGG4550.10073258045876494No Hit

[OK]Adapter Content

Adapter graph