FastQCFastQC Report
Wed 8 May 2024
EGAF00007961831

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007961831
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences422047
Total Bases13 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21090.4997073785621033No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8360.1980822041147076No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4680.11088812383454924No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)