FastQCFastQC Report
Wed 8 May 2024
EGAF00007961923

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007961923
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences467052
Total Bases14.4 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG61951.3264047686338993No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT30960.6628812209347139No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC18490.3958873958360097No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA13430.2875482815617961No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT12590.2695631321565907No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11740.2513638738298947No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG11520.24665347755710287No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG11260.24108664559834878No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA11250.24087253667685826No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG8580.1837054546388839No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC7420.15886881974598116No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG7400.15844060190300008No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA6440.13788614543990818No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG6290.13467451161755006No Hit
CGCCGTCCGCCACCTGGTCGTCGCCCGTTCT5700.12204208524960818No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5560.11904456034874061No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5550.11883045142725007No Hit
GGTTCCCGTGAACGCGCACGTGGTCGTGGCC5380.11519059976191087No Hit
CCTCGTCGTCCGCCGCCAGGCCGTCGCCCGT5220.11176485701806223No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA5010.10726856966676086No Hit

[OK]Adapter Content

Adapter graph