FastQCFastQC Report
Wed 8 May 2024
EGAF00007962007

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007962007
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences467395
Total Bases14.4 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG65321.3975331357845078No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12550.2685095048085666No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT10880.23277955476631115No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7950.1700916783448689No Hit
CGTAAAGCTAAACCGGCAACTAAGCCGGCAG6480.13864076423581767No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4810.10291081419356218No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)