FastQCFastQC Report
Wed 8 May 2024
EGAF00007962011

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007962011
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences474285
Total Bases14.7 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG67781.4290985377990026No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12680.2673498002256028No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11670.24605458743160757No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7860.16572314114930894No Hit
CGTAAAGCTAAACCGGCAACTAAGCCGGCAG7140.15054239539517378No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5150.10858450088027241No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)