FastQCFastQC Report
Wed 8 May 2024
EGAF00007962021

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007962021
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences480019
Total Bases14.8 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG29160.6074759540768178No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12570.2618646345248834No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5050.10520416900164369No Hit
AAACTGTCCTCTGGCTACCGCATCAACCGTG4890.1018709676075322No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)