FastQCFastQC Report
Wed 8 May 2024
EGAF00007962025

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007962025
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences483147
Total Bases14.9 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30040.621756939399396No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13000.2690692480756375No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5500.11383698957046198No Hit
AAACTGTCCTCTGGCTACCGCATCAACCGTG4870.10079747985602726No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)