FastQCFastQC Report
Wed 8 May 2024
EGAF00007962027

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007962027
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences452880
Total Bases14 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG65131.4381293057763647No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11960.2640876170287935No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT4850.1070923865041512No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)