FastQCFastQC Report
Wed 8 May 2024
EGAF00007962043

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007962043
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences451339
Total Bases13.9 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG61911.371696219471395No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA8920.19763415082676214No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5190.11499117071646812No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)