FastQCFastQC Report
Wed 8 May 2024
EGAF00007962071

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007962071
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences481110
Total Bases14.9 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG71951.4954999896073664No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA6960.14466546112115733No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG6550.13614350148614662No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG5220.108499095840868No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)