FastQCFastQC Report
Wed 8 May 2024
EGAF00007962115

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007962115
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences454187
Total Bases14 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG68381.5055472745807343No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT30190.6647041857208594No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC9040.19903696054708744No Hit
AAACTGTCCTCTGGCTACCGCATCAACCGTG9020.1985966132892399No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG7420.1633688326614368No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG7410.16314865903251305No Hit
GCGGCTGGTCTGGCAATTTCTCAGCGCATGA5830.12836122566255748No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5510.12131566953699688No Hit
ATCAACCGTGCAGCGGACGATGCGGCTGGTC4940.10876577268834203No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC4730.10414212648094288No Hit

[OK]Adapter Content

Adapter graph