FastQCFastQC Report
Wed 8 May 2024
EGAF00007962119

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007962119
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences426068
Total Bases13.2 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG64631.5168940169174874No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8450.19832514997606016No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5580.1309650102800492No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)