FastQCFastQC Report
Wed 8 May 2024
EGAF00007962327

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007962327
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences433921
Total Bases13.4 Mbp
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG41120.9476379340939941No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6050.13942630110089163No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5550.12790346629916505No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG5390.12421615916261255No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG4970.11453697792916222No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG4880.11246286766485143No Hit
CTGATCCTGGGCCTGGTTCTGGAACAGGTGC4400.10140094625519391No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)